Saturday, January 25, 2020

Tetanus Toxin: Structure and Purification

Tetanus Toxin: Structure and Purification Tetanus is regarded amongst the most severe and fatal disease since ancient times [1]. Tetanus is termed from a Greek word ‘Tetanos’ which means- to contract *. The disease is generally initiated due to deep wounds, cuts, and during catastrophic situations like natural calamities, physical trauma, etc. [a] It was first discovered by Hippocrates in early 19th century *. However it was etiologically described by Carle and Rattone who were first to produce tetanus in animals by injecting pus extracted from an infected human with the same disease in 1884. During this same period Nicolaier also produced tetanus in animals from soil samples. Further research in 1889 by Kitasato revealed that animals were infected by this disease when they were injected with a particular organism isolated from a human patient *. Nocard in 1897 revealed that this disease can be treated by the use of its antitoxin. Moreover in 1924 the significance of toxoid came into existence during World War I which was formulated by Descombey and this passive immunization against tetanus was majorly used during World War II *. Structure of tetanus toxin: The tetanus toxin is of 150kD comprising of three fragments i.e. A,B and C having a molecular weight of 50kD each [n]. Fragments A and B were observed to be non-spastically toxic and also to block the release of catecholamine. It also inhibits the action of synaptic nerves and thus exhibits an important role in the toxicity of the toxin. On the other hand fragment C is regarded as the non-toxic subunit but retaining the required antigenic properties of the toxin. This fragment is seen to bind with gangliosides, motor endplates and synaptic membranes. It also helps in transportation of the toxin from the periphery to the central nervous system [o]. Krieglestein et al. in 1990 stated that tetanus toxin is a 151-kD protein. The complete amino acid sequence is known. The mature toxin is made of two peptide and contains 10 half-cystine residues. Treatment with 4-vinylpyridine in the presence of 6M guanidine converted six of them into s-pyridylethyl cysteine residues are determines by amino acid analysis. When alkylation was preceded by mercaptolysis, all 10 halfcystine residues were recovered in the s-pyridylethylated form. It was therefore concluded that the toxin contains six sulfhydryl groups and two disulfide bond [r] Mode of Action: Rossetto et al. in 2001 reported that the neuroparalytic syndromes of tetanus is caused by neurotoxins produced by bacteria of the genus Clostridium of 150 kDa proteins consisting of three-domains, endowed with different functions: neurospecific binding, membrane translocation and specific proteolysis of three key components of the neuroexocytosis apparatus. After binding to the presynaptic membrane of motoneurons, tetanus neurotoxin (TeNT) is internalized and transported retroaxonally to the spinal cord, where it blocks neurotransmitter release from spinal inhibitory interneurons. TeNT cleave specifically at single but different peptide bonds, VAMP/synaptobrevin, a membrane protein of small synaptic vesicles [s]. Kegel et al. in 2002 stated that the 50kD ligh chain subunit comprises of zinc metalloproteases which cleaves synatobrevin that is not involved in neuroexocytosis [t]. Foster in 2009 Stated that TeNT enters the body via wounds and initially binds and internalizes into the peripheral terminals of motorneurons where it is transported by retrograde axonal transport to the motorneuron in the spinal cord. TeNT is transported to somatodendritic postsynaptic sites and is released into the synaptic cleft where it undergoes receptor mediated uptake into the presynaptic termini of the inhibitory interneurons, from where it translocates into the cytosol and inhibits neurotransmitter release. [u]. Starting material for purification of tetanus toxin: Raynaud in 1951 developed a technique of using non-autolyzed toxin direct from the organism i.e. Clostridium tetani [i] .This technique gave an advantage of obtaining a more concentrated form of toxin as compared to that obtained from the filtrates [i][j]. For this purpose the organism was generally cultured and subcultured using Tarozzi medium* and modified Tarozzi medium [j] Latham medium was also widely used for the same reason [j] [k]. M. Matsuda et.al in 1989 also used modified Latham medium for culturing of Clostridium tetani [o]. Muller and Miller in 1954 investigated that pancreatic digest of casein contained some inhibitory content which was solved by charcoal treatment [y]. Toxin was also extracted by treating the bacterial cells in hypertonic solution using 0.1M sodium citrate and 1M sodium chloride as stated by Bernard Bizzini et.al [q] Conventional method to produce tetanus vaccine: The Harvard strain of Clostridium tetani is grown in a fermentor for about a week using a semisynthetic medium. This leads the bacteria to lyze and release the toxin obtained in the supernatant. This method yielded about 60-80 Lf/ml. This yield is then filtered and detoxified using formaldehyde. This reacts with the toxin molecule mainly the amino groups of lysineresulting in imine formation, further reacts with the unstable groups of imidazole or phenol ring finally involves a cross-linking reaction between the both the amino groups. Formaldehyde also affects the 3-D structure, therefore making the toxic conformational epitopes [y]. Purification by HPLC: Kunihiro Ozutsumiet.al. in 1985 used extracts from the organism for purification of tetanus toxin using High performance liquid chromatographic methods (HPLC) [j]. The toxin extracted from the previously described method was initially purified using ammonium sulfate precipitation followed by ultracentrifugation in order to get rid of the unwanted particulate matter by filtering it through a 0.2 um membrane filter. The concentrated sample in the equilibrating buffer at a pH of 7.5 proceeded through a final step of purification by running it on HPLC using a column of a TSK G3000 SW of 0.75 x 60 dimensions. This column was equilibrated using 0.1M sodium-phosphate buffer at a pH of 6.8 and the flow rate was maintained at 0.6 ml/min. The fractions obtained were tested for its protein content at 280nm using a UV spectrophotometer [j]. Further the efficiency of HPLC was compared with another gel filtration method using Ultrogel column [j] [o]. Purification using Sephadex G-100: For large scale production of tetanus toxoid, Alcohol precipitation was used for immunization purpose by Pillemer L. et.al [b]. However, Levine et.al in 1951 used to purify the tetanus toxoid by ammonium sulfate precipitation [c]. Later, further purification and characterization of the toxoid was achieved by filtering it through Sephadex gels using G-100 columns as stated by Williams C. et.al in 1965 [d]. This simplified and low cost method yielded four separable fractions of the toxoid where the first two fractions of 55-65% non dialyzable nitrogen possessed significant antigenic properties. The next fraction obtained was of smaller molecular weight and showed poor antigenecity when injected in animals; however the fourth fraction obtained was not identified but was predicted to be metabolic by-products of the organism and had no significant role [d]. Before running on the column the protein concentration was determined using a UV spectrometer at 280nm. Chromatographic gel filtratio n was performed using a column of 1.2 x 0.062 m dimension. The column was packed and equilibrated with 0.1M phosphate buffer with a pH of 8.5, additionally 1% formaldehyde can be added to inhibit the bacterial growth. The void volume after equilibration was maintained at 800ml at the flow rate was fixed at 80ml/hr. The sample loading volume was around 50ml and was concentrated to about 100,000 Lf. The four fractions were collected and were further seperated by recycling them on the same column [d]. This method gave an efficient insight on how to purify and separate different components of the toxoid. M Matsuda in 1989 carried out the separation of fragment A-B treated with urea by running it on a ccolumn packed with Sephadex G-25, equilibrated with 0.02M tris-HCL buffer containing trace amounts of dithiothreitol and urea [o]. Other gels such as Sepharose 4B and Sephadex G-200 was also used by researchers like Bernard Bizzini, Immunodiffusion test was also carried out using Ouchterlony’s method [o] [p] [q]. Papain Digestion of Tetanus toxin: Further research by Helting and Zwister in 1974 made possible to obtain fragment C from Tetanus toxin which has significant antigenic properties but lack pathogenecity and thus occupies a major role in immunization [e]. Helting et.al stated that Tetanus toxin can be degraded in a specific pattern. The mild papain digestion cleaves the F(ab) region. The papain enzyme breaks the 150kD toxin into two parts, one comprising of the C-terminal of the heavy chain i.e. of 47kD which corresponds to the Fragment C of the toxin whereas the other part of 95kD consists of N-terminal heavy chain subunit along with the lighter chain polypeptide forming the fragment B (refer to Figure 2). This Fragment B was observed to have a toxic effect on mice when injected with a sufficient dose and also has an adverse effect on the nervous system, thus it was necessary to purify and obtain only Fragment C for immunization and to further study its immune response [f]. The purified Fragment C was separated and ob tained by chromatographic methods and by using anti-Fragment C IgG [f]. Ulrich Weller in 1989 performed papain digestion for 16 hours of overnight stirring of the toxin at 25Â °C at a concentration of 40ug/ml. The toxin was suspended in 10mM sodium-phosphate buffer at pH of 6.5 with 1mM EDTA and NaN3 and 10mM cysteine. After the incubation period 0.5mM of Ll-chloro-3-tosylamido-7-amino-2-heptanone was added as a stop solution in order to inactivate papain by further incubating it at room temperature for 30 min and was then cooled to 0Â °C with saturated ammonium sulfate solution at pH 6.5 with further centrifugation. The precipitate was resuspended in the same buffer mentioned. This further proceeded for its separation and purification on Sephadex G-100 column and the fractions were collected at the flow rate of 15ml/hr b*. These fractions were further pooled and contrated using a Centiprep 10 concentrator and the buffer was changed to 0.5 M NaCl with 30mM Tris-HCl at pH 7.5. The fragments B and C showed up homogenously on SDS-PAGE. The fragment C was further dialyzed against 10mM sodium phosphate buffer at a pH of 7.5. The samples obtained were further checked for its protein content at 285nm and was determined by modified lowry method after trichloroacetic acid precipitation. They also ran an SDS-PAGE using rerducing and non-reducing gels and was stained by Coomassie blue-250 and the chains and fragments of the toxin were determined according to their known amino acid sequence b* Other methods developed to obtain fragment C: Fishman et al. (1992) Pointed out that the non-toxic binding fragment of tetanus toxin (fragment C) binds avidly to neural tissue and has a growing number of neurobiological uses. Its current utility is limited by both its high commercial cost and the complex procedure for its preparation requiring highly purified tetanus toxin. A short procedure was developed which prepares fragments of tetanus toxin from crude C. tetani extracts. The resultant proteins are atoxic with molecular sizes and immunological properties closely resembling fragment C. These proteins undergo retrograde axonal and apparent transneuronal transport in a fashion similar to fragment C [v]. Ledoux et al. in 1994 Indicated that tetanus toxin once internalized via receptor-mediated endocytosis, form membrane channels in order to traverse the endosomal membrane and enter the cytoplasm of the nerve terminal forming an association between neurotoxin monomers which results in an oligomeric form of the neurotoxin necessary for assembly of a channel through the hydrophobic interior of the endosomal membrane, thereby allowing passage of the neurotoxin or its active fragment through the resulting pore [w]. Technique used to test the specificity of the heavy and light chain subunits: Matsuda and Yoneda in 1975 isolated the heavy and light chain subunits from a toxin reduced by treatment with dithiothreitol-urea[g] [h]. Kunihiro Ozutsumiet.al. in 1985 used the technique of electrophoresis using sodium-dodecyl-sulphate polyacrylamide gel i.e. SDS-PAGE as shown in Figure (3). and was further used to put up a western blot in order to check the specificity of the isolated subunits obtained [l] [m] [j]. SDS-PAGE allowed the toxin to stack at 49kD corresponding to the fragment C subunit and 85kD comprising of the 4heavy chain subunit [j] Goretzki and Habermann in 1985 characterized enzymatic fragments of tetanus toxin by immunoblotting using a set of previously characterized antibodies and a set of novel antibodies. The selected antibodies recognized the light chain, fragment C (ÃŽ ²1) and the complementary piece (ÃŽ ²2) of the heavy chain when blotted on nitrocellulose. All toxin preparations contained intrinsic esteroprotease activity which became manifest in the presence of urea. The main product of papain hydrolysis is fragment C, which appears as a double band under non reducing conditions but is homogeneous when reduced. Chymotryptic digestion hydrolyses the heavy chain well but leaves the light chain largely intact. Tetanus toxin is very resistant against trypsin as compared with other proteases, although this enzyme splits numerous different links [x].

Friday, January 17, 2020

American Beauty Film Critique Essay

There are few films that achieve the high level of quality exhibited by that of the 1990 beautiful tragedy, American Beauty. The film is a true masterpiece in both content and how this content is delivered to the viewers. It excels at being an enlightening and relevant drama about American life, and never fails to keep the audience entertained by providing many instances of well-placed humor. Every scene is filmed including metaphoric elements that not only show great stylistic and aesthetics, but also create a mood and feeling for the theme of the movie. American Beauty, directed by Sam Mendes, is a film that is set in suburban America, in a normal neighbourhood, following the everyday life of the central protagonist, Lester Burnham, who is living the typical ‘American Dream’. He appears to have a great job, big house, loving wife and daughter and even a white picket fence. However, all is not as it seems as appearance can often be deceiving; if we just â€Å"look closer†, we as audience members soon see that he realises both his wife, over bearing and controlling Carolyn and jaded teenage daughter, Jane think that, in the words of Jane, he is â€Å"this gigantic loser† and they’re right. The character of Lester is initially portrayed as a depressed, sad and lonely forty-year-old man, deprived of freedom and struggling to find anything worth living for. However as the film progresses Lester’s persona as a character is dramatically developed with the introduction of an equally intriguing character, Angela Hayes. Everything changes for Lester the night he is forced by his wife to his daughters school to see her perform as a cheerleader. There on the floor, engrossed in a pompon routin, parading and dancing around the court, he sees his ‘angel’: Angela his daughter’s high-school classmate. Angela fulfills the stereotypical idea of what beauty physical beauty is. She is thin, blonde, big blue-eyed and immediately catches Lester’s attention; Angela is not Lester’s highway to bliss, but she is at least a catalyst for his freedom (Ebert, 1999). His thoughts, and the dissatisfaction they stimulate, blast him free from years of emotional torture and bring him right back to his youth. It is from this moment on that Lester transforms into a spontaneous hormone-driven teenage boy, who smokes marihuana, works out, and uits his job all in order to impress his Angel-a. American Beauty uses Angela as the image of Lester’s broader want; that being his underlying desire for freedom and evidentially beauty. However, she symbolizes the potential underlying superficiality of physical beauty that is slowly revealed towards the end of the film. The film portrays many of the hidden problems within the white picket fence American dream along with addressing the problems many Americans have with feeling free and accepting their own identity. The film shows the vastly different worlds that people can live in whilst still living on the same street, and the disorder and frenzy that lies veiled in a society that we all try to portray as being as perfect as possible. In doing so, American Beauty reveals that the only way to calm the chaos is to find beauty in everything. To â€Å"look closer† is a must for truly understanding and identifying with the continuous bombardment of symbolism that is constantly being illustrated in this film. American Beauty portrays such themes as the falseness in lust, power and appearance and that we need to remind our selves â€Å"†¦of all the beauty there is in the world†, as beauty is a matter of opinion. Beauty however, is the most significant and explored theme in American Beauty. Another prevailing theme is the notion of the characters journey and transformation throughout the film. Lester’s journey can almost be compared to one from childhood from adulthood, figuratively speaking as evidentially, he steps into a mature, paternal phase where he takes responsibility and finds meaning in life, as an adult. Many techniques were used to portray these themes and influence audiences opinions of characters and events, including film techniques of cinematography, soundtrack as well as such visual techniques of symbolism, colour and contrast and both aesthetic and stylistic elements. American Beauty is a complex film that relies so heavily on mis-en-scene and cinematography to portray its message. In particular this is showcased during one scene that truly puts the ‘American Beauty’ into perspective; the opening scene or as it is often referred to as, the â€Å"High Point Scene†. The film explores the concepts of what true beauty really is and as suggested in the title of the film, the American Dream and how far this ‘dream’ really goes and what it actually means; this is explored further from the films tagline â€Å"look closer†; to think about perceived desire and to analyze more what these wants are. Through the exploration of the opening scene and a study of how the cinematography, mise en scene and sound foreshadows plot points in the rest of the film, the underlying messages and symbolism will be uncovered. The movie opens with a grainy shot of Jane Burnham reclining on a bed, complaining about her father. The scene begins with what is referred to as a flash forward, in cinematic terms. The line â€Å"Someone really should just put him out of his misery† is a hint towards the mid life crisis that the father Lester is currently going through and the ways in which she is aware of the pain he is dealing with, not knowing what he truly wants. Through the mise en scene and cinematography displayed throughout the scene, the audience is enabled to receive a glimpse into the events that have just occurred. Through the use of a lesser quality picture, shaky footage and dimmed lighting the audience is able to identify with the fact that the imagery being presented has that of a ‘home movie’ feel. The utilization of ‘raw footage’ within this drama genre of film gives the audience a sense of reality towards the character, hence making the dialogue seem more legitimate and believable. The addition of a pause into the characters dialogue helps to support and express the sense of ‘reality’ further, as it is as if she is really thinking about what she is saying. The rather ambiguous approach to the delivering of the line â€Å"You want me to kill him for you? † helps to draw attention to Jane’s reaction as apposed to the interviewers own intensions. This poses both Jane Burnham, the daughter and the unidentified interviewer as suspects to her father’s upcoming murder. However the abstruse approach from the interviewer combined with the daughters reply is foreshadowing what is to come later in the film, as each character related to the father is set up to be the possible murderer of his death. By using the body language as a primary tool for communication, the reply of â€Å"Yeah, would you† to the previous statement, suggests that she is almost daring the interviewer to kill him. This is expressed through the dominant changing of levels when she sits up, almost creating a shift in power, and looks down and straight into the camera, but at the same time also insinuates some sarcasm on her part. The audience learns in the very first lines of the movie that Jane’s dad, Lester, is not the father that she wants. The opening credits roll, and the shot switches to an aerial view of a neighborhood. The exact location is not specified, and that is very intentional. It is important that this not be a critique of a specific area, but of American culture as a whole. The scene begins with an aerial shot of a suburb, with Lester Burnham introducing the audience to his life and informing them that â€Å"In less than a year, I’ll be dead,† and â€Å"in a way, I’m dead already. † This dialogue is heightened through the following shots of Lester lying alone on a bed in a very dull coloured room, thus signifying the meaninglessness life in which he is leading. The utilization of an aerial shot here creates the idea that the world is looking down on him. The dominant use of bright lighting also indicates that it is the morning, however through the use of shadowing casted over Lester, it expressed to the audience that he is still in ‘the dark’; he is yet to be enlightened. Visual techniques are a constant feature in American Beauty, including the use of colour, contrast and symbolism. The primary recurring prop that is introduced at the beginning of the film is a rose, in which the audience first sees in a close up before Lester’s wife Carolyn Burnham picks it up. The first shot of the rose seems out of place, beginning with the flower filling the frame and then moving down to focus on the thorns before Carolyn’s clippers cut it. The rose symbolizes the impotence of not only the love life between Lester and Carolyn but the idea of the American Dream. This shot not only draws attention to the rose as a recurring object in the film, but it also serves as a metaphor for the Burnhams: on the outside they appear perfect, like the flower, but underneath they are rotten and broken (represented by the thorns). In this shot the character of Carolyn is also introduced and is instantly perceived as a cold, workaholic who is obsessive about how they (the family) is presented. This portrayal is demonstrated through the line â€Å"See the way the handle on those pruning shears matches her gardening clogs? That’s not an accident†, thus showing the audience what level she will go to, to maintain order and control. What is also noticeable about this shot is the mise en scene, in particular the red roses, white picket fences and the blue painting on the house. These colours in specific represent the American flag and therefore the American dream. These objects are most perceived to be included within the American dream as well as stereotypical figure of Carolyn, the suburban housewife. This ideology however, creates contrast with the cinematography. Many scenes are metaphoric in how they are shot, and what is in the frame symbolizes a higher, deeper meaning. This is demonstrated when, Lester looking out the window of his house at his wife, and the blinds on the window represent jail cell bars. Even the blocks of text on his computer screen at work, (shown later in the film) represent jail cell bars. Lester is â€Å"in jail† because his life at this point is so empty and missing substance. This cinematography technique often used in film nior is utilized to convey the emotions of disassociation and distance which in this case, is the way in which Lester feels towards his wife; he is no longer associated with her. American Beauty† is more than a biting satire on suburban life. This somewhat contrived story is meant to be an allegory. Alan Ball’s richly textured screenplay, brilliantly executed stylistic and aesthetic elements such as cinematography, mise en scene and symbols are effectively demonstrated throughout this masterpiece of a film. Every single shot is so carefully taken and layered with such vast significance that it is a marvel to behold. â€Å"Look closer,† the film’s tag line tells us. Look closer at the beautiful things we yearn for and spend our life chasing. There isn’t a single example of a film done better. Not only is the content top-notch, but the technical aspects of the movie are excellent as well. American Beauty truly demonstrates the power of film.

Thursday, January 9, 2020

Cancer in the World - 2071 Words

Millions of people in the world know someone or have personally been afflicted with the disease that causes uncontrolled division of abnormal cells in a part of the body, better known as cancer. In the US alone half of all men and one third of all women will develop cancer at some point in their life. There are over 100 known cancers and they all, even when treated or caught early can lead to serious illness and death. This is why researchers and doctors everywhere are looking for answers to cure these diseases and stop cancer in its tracks. Many cancers have been analyzed and great steps of progress have been made into cancer prevention, spotting the development of cancer cells early, and finding treatments to cure people who have been affected with the disease. One topic scientist have taken particular interest in is the miR-200 family and its role in tumor angiogenesis regulation. In a paper written by Pecot et al (2013), Tumor angiogenesis regulation by the miR-200 family, scient ist investigated the miR-200 familys role in inhibiting the epithelial-mesenchymal transition, which suggests it inhibits metastasis. The researchers hypothesized through direct and indirect mechanisms, the miR-200 family will show angiogenesis inhibition by regulating interleukin-8 and CXCL1 secreted by the tumour endothelial and cancer cells. This review will delve into the mir-200 family members, methods used by the researchers, and results that were obtained. The miR(micro RNA)-200 familyShow MoreRelatedThe Problem Of Cancer Is Not The End Of The World1835 Words   |  8 Pagesday from cancer and it gives an image of one that ruins people’s lives. What we need to understand is that cancer is a tough challenge and it’s going to give a person hell, but there’s a reason you should fight because it’s not the end of the world as some people portray it as. 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Wednesday, January 1, 2020

Indi Poverty And Inequality - 1308 Words

Inequality is defined as the wide gap between a low and a high income within an economy. Poverty is defined as being in the state of extremely poor. India is well renowned for having two classes, those living well above the poverty line, and those living well below. Currently, India is promoting strategies to decrease their percentage of people living under the poverty line. In 2012 the World Bank conducted some research to find out that 21.9% of the countries 1.295 billion, are living under the poverty line. As of 2014, the GNI per capita in India is $1570, US dollars, which is awfully low compared to the rest of the world. The big problem with this is that it isn’t developing at a state that it should be, although it is improving. India has traces linking to the government being corrupt, which doesn’t help the cause and this could be why it is showing poor economic development. One of the major problems that exists to reducing poverty and inequality in India is the poverty cycle. Developing countries generate a low income which then leads to low savings, poor health, education and low demand which then leads to low capital investment which then leads to low productivity which then leads to low income and this continues in a cycle as can be seen in figure 1. Much of India is stuck in this cycle. Social difference and inequality is a major problem and can reinforce, if not worsen, the continuous poverty problems in the poverty circle. As said before, the average salary ofShow MoreRelatedThe Negative Impacts of Illiteracy1171 Words   |  5 PagesSizin son xÉ™rà §Ã‰â„¢ng var. Ä °ndi onu xÉ™stÉ™xanaya almaq deyilsÉ™, o, nà ¶vbÉ™ti gà ¼n à ¶lÉ™cÉ™k. In English, this means, â€Å"Your son has cancer. If you don’t get him to the hospital now, he will die in the next day.† Imagine, though, if you had not been able to read the first message and even not been able to read the English translation. Your son would have died. 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Forster’s A Passage to India is written during the tension between the Indians and the British during the British Occupation of Indi. It underlines the problematic relationship of the British colonial context and the colonised Indians. The relationship between the two nations is that of hegemony and power. India, as Ahmad Abu Baker believes in his â€Å"Rethinking Identity: The Coloniser